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This orthogroup contains 254 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 254 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45975 | NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF | 220 / 254 | 86.6% | 98.2% of 224 | ≥80% support |
| Pfam | PF00628 | PHD | 204 / 254 | 80.3% | 97.1% of 210 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 222 / 254 | 87.4% | 99.1% of 224 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 221 / 254 | 87.0% | 98.7% of 224 | ≥80% support |
| GO | GO:0016589 Cellular Component | NURF complex | 220 / 254 | 86.6% | 98.2% of 224 | ≥80% support |
| GO | GO:0035064 Molecular Function | methylated histone binding | 220 / 254 | 86.6% | 98.2% of 224 | ≥80% support |
| Pfam | PF00439 | Bromodomain | 170 / 254 | 66.9% | 81.0% of 210 | ≥50% support |
| Pfam | PF15613 | WSD | 152 / 254 | 59.8% | 72.4% of 210 | ≥50% support |
| Pfam | PF02791 | DDT | 140 / 254 | 55.1% | 66.7% of 210 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 173 / 254 | 68.1% | 77.2% of 224 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000033039.1 | XP_020626511.1 | uncharacterized protein LOC110063856 isoform X2 [Orbicella faveolata] | Q12830 Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens OX | JBrowse |
| Cyphastrea salae | ENSOFVP00000033286.1 | XP_020626511.1 | uncharacterized protein LOC110063856 isoform X2 [Orbicella faveolata] | Q12830 Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens OX | JBrowse |
| Cyphastrea salae | ENSOFVP00000033293.1 | XP_020626511.1 | uncharacterized protein LOC110063856 isoform X2 [Orbicella faveolata] | Q9W0T1 Nucleosome-remodeling factor subunit NURF301 OS=Drosophila m | JBrowse |
| Cyphastrea salae | ENSOFVP00000033306.1 | XP_020626511.1 | uncharacterized protein LOC110063856 isoform X2 [Orbicella faveolata] | Q9W0T1 Nucleosome-remodeling factor subunit NURF301 OS=Drosophila m | JBrowse |
