← Back to the gene family browser
This orthogroup contains 251 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 251 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15683 | SCAFFOLD ATTACHMENT FACTOR B-RELATED | 207 / 251 | 82.5% | 99.0% of 209 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 209 / 251 | 83.3% | 100.0% of 209 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 207 / 251 | 82.5% | 99.0% of 209 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 207 / 251 | 82.5% | 99.0% of 209 | ≥80% support |
| GO | GO:0050684 Biological Process | regulation of mRNA processing | 207 / 251 | 82.5% | 99.0% of 209 | ≥80% support |
| Pfam | PF02037 | SAP | 187 / 251 | 74.5% | 88.6% of 211 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 183 / 251 | 72.9% | 86.7% of 211 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 191 / 251 | 76.1% | 91.4% of 209 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 184 / 251 | 73.3% | 88.0% of 209 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000024708.1 | XP_020618257.1 | SAFB-like transcription modulator [Orbicella faveolata] | D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Sa | JBrowse |
| Cyphastrea salae | ENSOFVP00000024720.1 | XP_020618257.1 | SAFB-like transcription modulator [Orbicella faveolata] | D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Sa | JBrowse |
