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This orthogroup contains 226 genes from 132 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 226 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13321 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18 | 185 / 226 | 81.9% | 98.9% of 187 | ≥80% support |
| Pfam | PF09637 | Med18 | 191 / 226 | 84.5% | 100.0% of 191 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 191 / 226 | 84.5% | 100.0% of 191 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 191 / 226 | 84.5% | 100.0% of 191 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 191 / 226 | 84.5% | 100.0% of 191 | ≥80% support |
| GO | GO:0006369 Biological Process | termination of RNA polymerase II transcription | 185 / 226 | 81.9% | 96.9% of 191 | ≥80% support |
| GO | GO:0070847 Cellular Component | core mediator complex | 185 / 226 | 81.9% | 96.9% of 191 | ≥80% support |
| KEGG | K15135 | MED18 — Transcription machinery | 128 / 226 | 56.6% | 99.2% of 129 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000028251.1 | XP_020626285.1 | mediator of RNA polymerase II transcription subunit 18-like [Orbicella faveolata] | Q7T3H7 Mediator of RNA polymerase II transcription subunit 18 OS=Da | JBrowse |
| Cyphastrea salae | ENSOFVP00000028263.1 | XP_020626285.1 | mediator of RNA polymerase II transcription subunit 18-like [Orbicella faveolata] | Q7T3H7 Mediator of RNA polymerase II transcription subunit 18 OS=Da | JBrowse |
| Cyphastrea salae | ENSOFVP00000028267.1 | XP_020626285.1 | mediator of RNA polymerase II transcription subunit 18-like [Orbicella faveolata] | Q7T3H7 Mediator of RNA polymerase II transcription subunit 18 OS=Da | JBrowse |
