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This orthogroup contains 221 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 221 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22848 | WD40 REPEAT PROTEIN | 193 / 221 | 87.3% | 100.0% of 193 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 184 / 221 | 83.3% | 96.8% of 190 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 193 / 221 | 87.3% | 100.0% of 193 | ≥80% support |
| GO | GO:0008380 Biological Process | RNA splicing | 193 / 221 | 87.3% | 100.0% of 193 | ≥80% support |
| GO | GO:0071011 Cellular Component | precatalytic spliceosome | 193 / 221 | 87.3% | 100.0% of 193 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 191 / 221 | 86.4% | 99.0% of 193 | ≥80% support |
| Pfam | PF17814 | LisH_TPL — LisH-like dimerisation domain | 153 / 221 | 69.2% | 80.5% of 190 | ≥50% support |
| KEGG | K13111 | SMU1 — Spliceosome | 153 / 221 | 69.2% | 100.0% of 153 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000021266.1 | XP_020601516.1 | WD40 repeat-containing protein SMU1-like [Orbicella faveolata] | Q2TBS9 WD40 repeat-containing protein SMU1 OS=Bos taurus OX=9913 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000021274.1 | XP_020601516.1 | WD40 repeat-containing protein SMU1-like [Orbicella faveolata] | Q6P4J8 WD40 repeat-containing protein SMU1 OS=Xenopus tropicalis OX | JBrowse |
