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This orthogroup contains 214 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 214 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23138 | RAN BINDING PROTEIN | 172 / 214 | 80.4% | 99.4% of 173 | ≥80% support |
| GO | GO:0006606 Biological Process | protein import into nucleus | 172 / 214 | 80.4% | 95.0% of 181 | ≥80% support |
| KEGG | K14295 | NUP50, NPAP60 — Messenger RNA biogenesis | 172 / 214 | 80.4% | 100.0% of 172 | ≥80% support |
| Pfam | PF00638 | Ran_BP1 — RanBP1 domain | 164 / 214 | 76.6% | 92.1% of 178 | ≥50% support |
| Pfam | PF08911 | NUP50 | 146 / 214 | 68.2% | 82.0% of 178 | ≥50% support |
| GO | GO:0046907 Biological Process | intracellular transport | 165 / 214 | 77.1% | 91.2% of 181 | ≥50% support |
| GO | GO:0005643 Cellular Component | nuclear pore | 146 / 214 | 68.2% | 80.7% of 181 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000031150.1 | XP_020620473.1 | nuclear pore complex protein Nup50-like [Orbicella faveolata] | Q9JIH2 Nuclear pore complex protein Nup50 OS=Mus musculus OX=10090 | JBrowse |
| Cyphastrea salae | ENSOFVP00000031157.1 | XP_020620473.1 | nuclear pore complex protein Nup50-like [Orbicella faveolata] | O08587 Nuclear pore complex protein Nup50 OS=Rattus norvegicus OX=1 | JBrowse |
