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This orthogroup contains 206 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 206 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23415 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 166 / 206 | 80.6% | 100.0% of 166 | ≥80% support |
| Pfam | PF17833 | UPF0113_N — UPF0113 Pre-PUA domain | 176 / 206 | 85.4% | 97.2% of 181 | ≥80% support |
| Pfam | PF03657 | UPF0113 | 171 / 206 | 83.0% | 94.5% of 181 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 172 / 206 | 83.5% | 100.0% of 172 | ≥80% support |
| GO | GO:0005730 Cellular Component | nucleolus | 166 / 206 | 80.6% | 96.5% of 172 | ≥80% support |
| GO | GO:0030687 Cellular Component | preribosome, large subunit precursor | 166 / 206 | 80.6% | 96.5% of 172 | ≥80% support |
| GO | GO:0042273 Biological Process | ribosomal large subunit biogenesis | 166 / 206 | 80.6% | 96.5% of 172 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 144 / 206 | 69.9% | 83.7% of 172 | ≥50% support |
| GO | GO:0042255 Biological Process | ribosome assembly | 144 / 206 | 69.9% | 83.7% of 172 | ≥50% support |
| KEGG | K07565 | NIP7 — Ribosome biogenesis | 151 / 206 | 73.3% | 100.0% of 151 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000026228.1 | XP_020630406.1 | 60S ribosome subunit biogenesis protein NIP7 homolog [Orbicella faveolata] | A4QND5 60S ribosome subunit biogenesis protein NIP7 homolog OS=Xeno | JBrowse |
