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This orthogroup contains 120 genes from 86 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 120 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF15328 | GCOM2 — Putative GRINL1B complex locus protein 2 | 110 / 120 | 91.7% | 100.0% of 110 | ≥80% support |
| GO | GO:0003711 Molecular Function | transcription elongation factor activity | 110 / 120 | 91.7% | 100.0% of 110 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 110 / 120 | 91.7% | 100.0% of 110 | ≥80% support |
| GO | GO:0006368 Biological Process | transcription elongation by RNA polymerase II | 110 / 120 | 91.7% | 100.0% of 110 | ≥80% support |
| PANTHER | PTHR23171 | GDOWN1 | 95 / 120 | 79.2% | 100.0% of 95 | ≥50% support |
| KEGG | K21987 | POLR2M, GRINL1A — Transcription machinery | 85 / 120 | 70.8% | 100.0% of 85 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000020512.1 | XP_020621240.1 | DNA-directed RNA polymerase II subunit GRINL1A-like [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000020520.1 | KAJ7339635.1 | maintenance of ER location [Desmophyllum pertusum] | Q91XQ4 DNA-directed RNA polymerase II subunit GRINL1A OS=Rattus nor | JBrowse |
