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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7336656.1 | KAJ7336656.1 | homeobox [Desmophyllum pertusum] | Q03358 Homeobox protein MSX-2 OS=Mus musculus OX=10090 GN=Msx2 PE=1 | JBrowse |
| Desmophyllum pertusum | KAJ7340061.1 | KAJ7340061.1 | hypothetical protein OS493_002784 [Desmophyllum pertusum] | Q9JLZ9 Ventral anterior homeobox 2 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Desmophyllum pertusum | KAJ7340065.1 | KAJ7340065.1 | hypothetical protein OS493_002788 [Desmophyllum pertusum] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Desmophyllum pertusum | KAJ7350225.1 | KAJ7350225.1 | Homeobox protein Hox-A9 [Desmophyllum pertusum] | P10179 Homeobox protein HB4 (Fragment) OS=Tripneustes gratilla OX=7 | JBrowse |
| Desmophyllum pertusum | KAJ7350226.1 | KAJ7350226.1 | GS homeobox 2 [Desmophyllum pertusum] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Desmophyllum pertusum | KAJ7360217.1 | KAJ7360217.1 | Ventral anterior homeobox 1 [Desmophyllum pertusum] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7369733.1 | KAJ7369733.1 | Homeobox protein MOX-2 [Desmophyllum pertusum] | P39021 Homeobox protein MOX-2 OS=Xenopus laevis OX=8355 GN=meox2 PE | JBrowse |
| Desmophyllum pertusum | KAJ7369734.1 | KAJ7369734.1 | hypothetical protein OS493_036765 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7370387.1 | KAJ7370387.1 | hypothetical protein OS493_032563 [Desmophyllum pertusum] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7371366.1 | KAJ7371366.1 | hypothetical protein OS493_026483 [Desmophyllum pertusum] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Desmophyllum pertusum | KAJ7376026.1 | KAJ7376026.1 | hypothetical protein OS493_037419 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Desmophyllum pertusum | KAJ7376927.1 | KAJ7376927.1 | hypothetical protein OS493_031523 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7377057.1 | KAJ7377057.1 | hypothetical protein OS493_031015 [Desmophyllum pertusum] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7377059.1 | KAJ7377059.1 | hypothetical protein OS493_031017 [Desmophyllum pertusum] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7377067.1 | KAJ7377067.1 | hypothetical protein OS493_031025 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7377068.1 | KAJ7377068.1 | hypothetical protein OS493_031026 [Desmophyllum pertusum] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Desmophyllum pertusum | KAJ7378104.1 | KAJ7378104.1 | hypothetical protein OS493_024769 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Desmophyllum pertusum | KAJ7378106.1 | KAJ7378106.1 | hypothetical protein OS493_024771 [Desmophyllum pertusum] | P43687 Homeobox protein HMX2 OS=Mus musculus OX=10090 GN=Hmx2 PE=2 | JBrowse |
| Desmophyllum pertusum | KAJ7378108.1 | KAJ7378108.1 | hypothetical protein OS493_024773 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Desmophyllum pertusum | KAJ7378109.1 | KAJ7378109.1 | hypothetical protein OS493_024774 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
