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This orthogroup contains 634 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 634 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11455 | CRYPTOCHROME | 579 / 634 | 91.3% | 99.8% of 580 | ≥80% support |
| Pfam | PF03441 | FAD_binding_7 — FAD binding domain of DNA photolyase | 549 / 634 | 86.6% | 95.3% of 576 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 579 / 634 | 91.3% | 99.8% of 580 | ≥80% support |
| GO | GO:0071949 Molecular Function | FAD binding | 579 / 634 | 91.3% | 99.8% of 580 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 568 / 634 | 89.6% | 97.9% of 580 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 568 / 634 | 89.6% | 97.9% of 580 | ≥80% support |
| GO | GO:0032922 Biological Process | circadian regulation of gene expression | 568 / 634 | 89.6% | 97.9% of 580 | ≥80% support |
| GO | GO:0043153 Biological Process | entrainment of circadian clock by photoperiod | 568 / 634 | 89.6% | 97.9% of 580 | ≥80% support |
| Pfam | PF00875 | DNA_photolyase — DNA photolyase | 505 / 634 | 79.7% | 87.7% of 576 | ≥50% support |
| GO | GO:0045892 Biological Process | negative regulation of DNA-templated transcription | 428 / 634 | 67.5% | 73.8% of 580 | ≥50% support |
| KEGG | K02295 | CRY — Circadian rhythm | 321 / 634 | 50.6% | 96.4% of 333 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7339436.1 | KAJ7339436.1 | hypothetical protein OS493_005834 [Desmophyllum pertusum] | Q16526 Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1 | JBrowse |
| Desmophyllum pertusum | KAJ7377078.1 | KAJ7377078.1 | hypothetical protein OS493_030672 [Desmophyllum pertusum] | Q16526 Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1 | JBrowse |
| Desmophyllum pertusum | KAJ7377079.1 | KAJ7377079.1 | hypothetical protein OS493_030673 [Desmophyllum pertusum] | Q5IZC5 Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 S | JBrowse |
| Desmophyllum pertusum | KAJ7379316.1 | KAJ7379316.1 | Cryptochrome-1 [Desmophyllum pertusum] | Q16526 Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1 | JBrowse |
| Desmophyllum pertusum | KAJ7379317.1 | KAJ7379317.1 | Cryptochrome-2 [Desmophyllum pertusum] | Q8QG61 Cryptochrome-1 OS=Gallus gallus OX=9031 GN=CRY1 PE=2 SV=1 | JBrowse |
| Desmophyllum pertusum | KAJ7389919.1 | KAJ7389919.1 | hypothetical protein OS493_028382 [Desmophyllum pertusum] | Q32Q86 Cryptochrome-1 OS=Rattus norvegicus OX=10116 GN=Cry1 PE=1 SV | JBrowse |
