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This orthogroup contains 379 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 379 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00319 | SRF-TF — SRF-type transcription factor (DNA-binding and dimerisation domain) | 310 / 379 | 81.8% | 99.0% of 313 | ≥80% support |
| Pfam | PF12347 | HJURP_C — Holliday junction regulator protein family C-terminal repeat | 308 / 379 | 81.3% | 98.4% of 313 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 310 / 379 | 81.8% | 99.7% of 311 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 310 / 379 | 81.8% | 99.7% of 311 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 310 / 379 | 81.8% | 99.7% of 311 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 310 / 379 | 81.8% | 99.7% of 311 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 310 / 379 | 81.8% | 99.7% of 311 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 307 / 379 | 81.0% | 98.7% of 311 | ≥80% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 299 / 379 | 78.9% | 96.1% of 311 | ≥50% support |
| KEGG | K09260 | MEF2A — Transcription factors | 237 / 379 | 62.5% | 98.8% of 240 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7339607.1 | KAJ7339607.1 | hypothetical protein OS493_006011 [Desmophyllum pertusum] | – | JBrowse |
| Desmophyllum pertusum | KAJ7339608.1 | KAJ7339608.1 | Myocyte-specific enhancer factor 2C [Desmophyllum pertusum] | A4UTP7 Myocyte-specific enhancer factor 2C OS=Sus scrofa OX=9823 GN | JBrowse |
