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This orthogroup contains 346 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 346 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23389 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 | 265 / 346 | 76.6% | 100.0% of 265 | ≥50% support |
| Pfam | PF00533 | BRCT | 216 / 346 | 62.4% | 75.0% of 288 | ≥50% support |
| Pfam | PF00004 | AAA | 203 / 346 | 58.7% | 70.5% of 288 | ≥50% support |
| Pfam | PF08519 | RFC1 | 190 / 346 | 54.9% | 66.0% of 288 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 267 / 346 | 77.2% | 98.2% of 272 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 265 / 346 | 76.6% | 97.4% of 272 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 239 / 346 | 69.1% | 87.9% of 272 | ≥50% support |
| GO | GO:0006260 Biological Process | DNA replication | 208 / 346 | 60.1% | 76.5% of 272 | ≥50% support |
| GO | GO:0003689 Molecular Function | DNA clamp loader activity | 204 / 346 | 59.0% | 75.0% of 272 | ≥50% support |
| GO | GO:0005663 Cellular Component | DNA replication factor C complex | 204 / 346 | 59.0% | 75.0% of 272 | ≥50% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 203 / 346 | 58.7% | 74.6% of 272 | ≥50% support |
| KEGG | K10754 | RFC1 — DNA repair and recombination proteins | 180 / 346 | 52.0% | 98.4% of 183 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7371467.1 | KAJ7371467.1 | replication factor C subunit 1 [Desmophyllum pertusum] | P35251 Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RF | JBrowse |
| Desmophyllum pertusum | KAJ7371468.1 | KAJ7371468.1 | replication factor C subunit 1 [Desmophyllum pertusum] | P35601 Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=R | JBrowse |
