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This orthogroup contains 291 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 291 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13258 | UNCHARACTERIZED | 251 / 291 | 86.3% | 98.8% of 254 | ≥80% support |
| GO | GO:0000149 Molecular Function | SNARE binding | 251 / 291 | 86.3% | 98.8% of 254 | ≥80% support |
| GO | GO:0032456 Biological Process | endocytic recycling | 251 / 291 | 86.3% | 98.8% of 254 | ≥80% support |
| GO | GO:0042147 Biological Process | retrograde transport, endosome to Golgi | 251 / 291 | 86.3% | 98.8% of 254 | ≥80% support |
| GO | GO:1990745 Cellular Component | EARP complex | 251 / 291 | 86.3% | 98.8% of 254 | ≥80% support |
| Pfam | PF10475 | Vps54_N — Vacuolar-sorting protein 54, of GARP complex | 206 / 291 | 70.8% | 82.7% of 249 | ≥50% support |
| Pfam | PF10474 | Syndetin_C — Syndetin, C-terminal | 204 / 291 | 70.1% | 81.9% of 249 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7369798.1 | KAJ7369798.1 | Syndetin [Desmophyllum pertusum] | F1LSG8 Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1 | JBrowse |
| Desmophyllum pertusum | KAJ7369799.1 | KAJ7369799.1 | hypothetical protein OS493_036442 [Desmophyllum pertusum] | Q96JG6 Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3 | JBrowse |
