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This orthogroup contains 277 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR43979 | PRE-MRNA-PROCESSING FACTOR 17 | 236 / 277 | 85.2% | 95.9% of 246 | ≥80% support |
| Pfam | PF00400 | WD40 — WD domain, G-beta repeat | 222 / 277 | 80.1% | 98.7% of 225 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 237 / 277 | 85.6% | 96.3% of 246 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 236 / 277 | 85.2% | 95.9% of 246 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 236 / 277 | 85.2% | 95.9% of 246 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 224 / 277 | 80.9% | 91.1% of 246 | ≥80% support |
| KEGG | K12816 | CDC40, PRP17 — Spliceosome | 195 / 277 | 70.4% | 96.5% of 202 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7388745.1 | KAJ7388745.1 | pre-mRNA-processing factor 17 [Desmophyllum pertusum] | Q9DC48 Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cd | JBrowse |
