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This orthogroup contains 276 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 276 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12858 | RIBOSOME BIOGENESIS PROTEIN | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0000462 Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0000479 Biological Process | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0003924 Molecular Function | GTPase activity | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0005525 Molecular Function | GTP binding | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0034511 Molecular Function | U3 snoRNA binding | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0042254 Biological Process | ribosome biogenesis | 244 / 276 | 88.4% | 99.6% of 245 | ≥80% support |
| GO | GO:0030686 Cellular Component | 90S preribosome | 243 / 276 | 88.0% | 99.2% of 245 | ≥80% support |
| Pfam | PF04950 | RIBIOP_C — 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal | 199 / 276 | 72.1% | 84.0% of 237 | ≥50% support |
| Pfam | PF08142 | AARP2CN | 184 / 276 | 66.7% | 77.6% of 237 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 185 / 276 | 67.0% | 75.5% of 245 | ≥50% support |
| KEGG | K14569 | BMS1 — Ribosome biogenesis | 165 / 276 | 59.8% | 98.2% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7351820.1 | KAJ7351820.1 | Glycoside hydrolase 2 (Mannanase, beta-galactosidase) [Desmophyllum pertusum] | Q14692 Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX= | JBrowse |
| Desmophyllum pertusum | KAJ7351821.1 | KAJ7351821.1 | Glycoside hydrolase 2 (Mannanase, beta-galactosidase) [Desmophyllum pertusum] | Q14692 Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX= | JBrowse |
| Desmophyllum pertusum | KAJ7351822.1 | KAJ7351822.1 | Glycoside hydrolase 2 (Mannanase, beta-galactosidase) [Desmophyllum pertusum] | Q14692 Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX= | JBrowse |
