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This orthogroup contains 272 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 272 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0008168 Molecular Function | methyltransferase activity | 234 / 272 | 86.0% | 100.0% of 234 | ≥80% support |
| PANTHER | PTHR10920 | RIBOSOMAL RNA METHYLTRANSFERASE | 208 / 272 | 76.5% | 98.1% of 212 | ≥50% support |
| Pfam | PF01728 | FtsJ | 212 / 272 | 77.9% | 89.1% of 238 | ≥50% support |
| Pfam | PF07780 | Spb1_C — Spb1 C-terminal domain | 196 / 272 | 72.1% | 82.4% of 238 | ≥50% support |
| Pfam | PF11861 | DUF3381 | 191 / 272 | 70.2% | 80.3% of 238 | ≥50% support |
| GO | GO:0001510 Biological Process | RNA methylation | 212 / 272 | 77.9% | 90.6% of 234 | ≥50% support |
| GO | GO:0032259 Biological Process | methylation | 212 / 272 | 77.9% | 90.6% of 234 | ≥50% support |
| GO | GO:0031167 Biological Process | rRNA methylation | 212 / 272 | 77.9% | 90.6% of 234 | ≥50% support |
| GO | GO:0008650 Molecular Function | rRNA (uridine-2'-O-)-methyltransferase activity | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0030687 Cellular Component | preribosome, large subunit precursor | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0016435 Molecular Function | rRNA (guanine) methyltransferase activity | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0000463 Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0008173 Molecular Function | RNA methyltransferase activity | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0005730 Cellular Component | nucleolus | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0000466 Biological Process | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 208 / 272 | 76.5% | 88.9% of 234 | ≥50% support |
| GO | GO:0006364 Biological Process | rRNA processing | 196 / 272 | 72.1% | 83.8% of 234 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 196 / 272 | 72.1% | 83.8% of 234 | ≥50% support |
| GO | GO:0008649 Molecular Function | rRNA methyltransferase activity | 146 / 272 | 53.7% | 62.4% of 234 | ≥50% support |
| KEGG | K14857 | SPB1, FTSJ3 — Ribosome biogenesis | 170 / 272 | 62.5% | 97.7% of 174 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7373969.1 | KAJ7373969.1 | pre-rRNA processing protein ftsj3 [Desmophyllum pertusum] | Q5RJT2 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 OS=Rattus n | JBrowse |
