← Back to the gene family browser
This orthogroup contains 266 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 266 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR18934 | ATP-DEPENDENT RNA HELICASE | 216 / 266 | 81.2% | 99.1% of 218 | ≥80% support |
| GO | GO:0004386 Molecular Function | helicase activity | 217 / 266 | 81.6% | 99.5% of 218 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 216 / 266 | 81.2% | 99.1% of 218 | ≥80% support |
| GO | GO:0000184 Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 214 / 266 | 80.5% | 98.2% of 218 | ≥80% support |
| GO | GO:0005622 Cellular Component | intracellular anatomical structure | 214 / 266 | 80.5% | 98.2% of 218 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 179 / 266 | 67.3% | 88.6% of 202 | ≥50% support |
| Pfam | PF21010 | HA2_C — Helicase associated domain (HA2), ratchet-like | 179 / 266 | 67.3% | 88.6% of 202 | ≥50% support |
| Pfam | PF07717 | OB_NTP_bind — Oligonucleotide/oligosaccharide-binding (OB)-fold | 169 / 266 | 63.5% | 83.7% of 202 | ≥50% support |
| KEGG | K20101 | DHX34 — Messenger RNA biogenesis | 166 / 266 | 62.4% | 98.8% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7391719.1 | KAJ7391719.1 | DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Desmophyllum pertusum] | Q9DBV3 Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus OX | JBrowse |
