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This orthogroup contains 239 genes from 140 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 239 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13145 | SSM4 PROTEIN | 215 / 239 | 90.0% | 99.5% of 216 | ≥80% support |
| GO | GO:0030176 Cellular Component | obsolete integral component of endoplasmic reticulum membrane | 215 / 239 | 90.0% | 99.5% of 216 | ≥80% support |
| GO | GO:0030433 Biological Process | obsolete ubiquitin-dependent ERAD pathway | 215 / 239 | 90.0% | 99.5% of 216 | ≥80% support |
| Pfam | PF12906 | RINGv — RING-variant domain | 144 / 239 | 60.3% | 96.6% of 149 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 147 / 239 | 61.5% | 68.1% of 216 | ≥50% support |
| KEGG | K10661 | MARCH6, DOA10 — Ubiquitin system | 178 / 239 | 74.5% | 97.8% of 182 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7384978.1 | KAJ7384978.1 | E3 ubiquitin-protein ligase march6 [Desmophyllum pertusum] | Q6ZQ89 E3 ubiquitin-protein ligase MARCHF6 OS=Mus musculus OX=10090 | JBrowse |
| Desmophyllum pertusum | KAJ7384979.1 | KAJ7384979.1 | E3 ubiquitin-protein ligase march6 [Desmophyllum pertusum] | O60337 E3 ubiquitin-protein ligase MARCHF6 OS=Homo sapiens OX=9606 | JBrowse |
