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This orthogroup contains 221 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 221 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12896 | PAX6 NEIGHBOR PROTEIN PAXNEB | 195 / 221 | 88.2% | 99.5% of 196 | ≥80% support |
| Pfam | PF05625 | PAXNEB | 196 / 221 | 88.7% | 100.0% of 196 | ≥80% support |
| GO | GO:0002098 Biological Process | tRNA wobble uridine modification | 196 / 221 | 88.7% | 100.0% of 196 | ≥80% support |
| GO | GO:0033588 Cellular Component | elongator holoenzyme complex | 196 / 221 | 88.7% | 100.0% of 196 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 195 / 221 | 88.2% | 99.5% of 196 | ≥80% support |
| GO | GO:0008023 Cellular Component | transcription elongation factor complex | 195 / 221 | 88.2% | 99.5% of 196 | ≥80% support |
| KEGG | K11375 | ELP4 — Transfer RNA biogenesis | 150 / 221 | 67.9% | 100.0% of 150 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7384443.1 | KAJ7384443.1 | Elongator subunit elp4 [Desmophyllum pertusum] | Q5XG58 Elongator complex protein 4 OS=Xenopus laevis OX=8355 GN=elp | JBrowse |
| Desmophyllum pertusum | KAJ7384444.1 | KAJ7384444.1 | Elongator subunit elp4 [Desmophyllum pertusum] | Q566Y1 Elongator complex protein 4 OS=Danio rerio OX=7955 GN=elp4 P | JBrowse |
