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This orthogroup contains 215 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 215 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12170 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| Pfam | PF10607 | CTLH | 183 / 215 | 85.1% | 98.9% of 185 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| GO | GO:0034657 Cellular Component | GID complex | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| GO | GO:0043161 Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | 184 / 215 | 85.6% | 98.9% of 186 | ≥80% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 174 / 215 | 80.9% | 93.6% of 186 | ≥80% support |
| Pfam | PF13445 | zf-RING_UBOX — RING-type zinc-finger | 139 / 215 | 64.7% | 75.1% of 185 | ≥50% support |
| KEGG | K23333 | RMND5 — Ubiquitin system | 159 / 215 | 74.0% | 98.2% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7392393.1 | KAJ7392393.1 | E3 ubiquitin-protein transferase rmnd5a [Desmophyllum pertusum] | Q640V2 E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX= | JBrowse |
