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This orthogroup contains 200 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 200 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10797 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| Pfam | PF04857 | CAF1 | 174 / 200 | 87.0% | 100.0% of 174 | ≥80% support |
| GO | GO:0000932 Cellular Component | P-body | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| GO | GO:0004535 Molecular Function | poly(A)-specific ribonuclease activity | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| GO | GO:0030014 Cellular Component | CCR4-NOT complex | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| GO | GO:0030015 Cellular Component | CCR4-NOT core complex | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| GO | GO:0043928 Biological Process | obsolete exonucleolytic catabolism of deadenylated mRNA | 179 / 200 | 89.5% | 100.0% of 179 | ≥80% support |
| KEGG | K12581 | CNOT7_8, CAF1, POP2 — Messenger RNA biogenesis | 170 / 200 | 85.0% | 100.0% of 170 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Desmophyllum pertusum | KAJ7371789.1 | KAJ7371789.1 | CCR4-NOT transcription complex subunit 8 [Desmophyllum pertusum] | Q3ZC01 CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=99 | JBrowse |
