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1 sequences in this family share a gene identifier with another member, so the 2,804 sequences above are 2,803 distinct genes — none is counted twice.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000004541.1 | XP_028398114.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Dendronephthya gigantea] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000004581.1 | XP_028398114.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Dendronephthya gigantea] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000010476.1 | none | – | JBrowse | |
| Eunicella cavolini | ENSLDHP00000010794.1 | CAB3993097.1 | Protocadherin Fat 4 [Paramuricea clavata] | A8TX70 Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 | JBrowse |
| Eunicella cavolini | ENSLDHP00000010802.1 | CAB3993096.1 | Protocadherin Fat 4, partial [Paramuricea clavata] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Eunicella cavolini | ENSLDHP00000010815.1 | CAB3993096.1 | Protocadherin Fat 4, partial [Paramuricea clavata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000010828.1 | CAB3993096.1 | Protocadherin Fat 4, partial [Paramuricea clavata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000010936.1 | CAB4001436.1 | Protocadherin Fat 4 [Paramuricea clavata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000012544.1 | CAB3993097.1 | Protocadherin Fat 4 [Paramuricea clavata] | Q9H251 Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2 | JBrowse |
| Eunicella cavolini | ENSLDHP00000012552.1 | CAB3993097.1 | Protocadherin Fat 4 [Paramuricea clavata] | Q9H251 Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2 | JBrowse |
| Eunicella cavolini | ENSLDHP00000013581.1 | XP_028398114.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Dendronephthya gigantea] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000016428.1 | XP_028399798.1 | protocadherin Fat 4-like isoform X1 [Dendronephthya gigantea] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Eunicella cavolini | ENSLDHP00000017038.1 | CAB3991370.1 | fibrocystin-L-like [Paramuricea clavata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000017614.1 | XP_028404996.1 | cadherin-23-like isoform X1 [Dendronephthya gigantea] | P58365 Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000017681.1 | XP_028399798.1 | protocadherin Fat 4-like isoform X1 [Dendronephthya gigantea] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Eunicella cavolini | ENSLDHP00000017718.1 | CAB3982044.1 | protocadherin Fat 4 [Paramuricea clavata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000017750.1 | XP_028399941.1 | protocadherin Fat 4-like isoform X3 [Dendronephthya gigantea] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Eunicella cavolini | ENSLDHP00000019263.1 | XP_028399799.1 | protocadherin Fat 4-like isoform X2 [Dendronephthya gigantea] | P33151 Cadherin-5 OS=Homo sapiens OX=9606 GN=CDH5 PE=1 SV=5 | JBrowse |
| Eunicella cavolini | ENSLDHP00000020721.1 | XP_046854648.1 | protocadherin Fat 2-like isoform X2 [Xenia sp. Carnegie-2017] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Eunicella cavolini | ENSLDHP00000021155.1 | CAB4037414.1 | protocadherin-like wing polarity stan, partial [Paramuricea clavata] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
