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This orthogroup contains 1,253 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,253 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45793 | HOMEOBOX PROTEIN | 1116 / 1,253 | 89.1% | 98.5% of 1,133 | ≥80% support |
| Pfam | PF00046 | Homeodomain | 1133 / 1,253 | 90.4% | 99.9% of 1,134 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1139 / 1,253 | 90.9% | 100.0% of 1,139 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1131 / 1,253 | 90.3% | 99.3% of 1,139 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1131 / 1,253 | 90.3% | 99.3% of 1,139 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1121 / 1,253 | 89.5% | 98.4% of 1,139 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 1121 / 1,253 | 89.5% | 98.4% of 1,139 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1063 / 1,253 | 84.8% | 93.3% of 1,139 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000039740.1 | CAB3977452.1 | homeobox OTX1 isoform X2 [Paramuricea clavata] | P32242 Homeobox protein OTX1 OS=Homo sapiens OX=9606 GN=OTX1 PE=1 S | JBrowse |
| Eunicella cavolini | ENSLDHP00000039749.1 | CAB3977452.1 | homeobox OTX1 isoform X2 [Paramuricea clavata] | P32242 Homeobox protein OTX1 OS=Homo sapiens OX=9606 GN=OTX1 PE=1 S | JBrowse |
| Eunicella cavolini | ENSLDHP00000040821.1 | CAB3977451.1 | homeobox otx5-like [Paramuricea clavata] | Q63410 Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000040828.1 | CAB3977451.1 | homeobox otx5-like [Paramuricea clavata] | Q63410 Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000040834.1 | CAB3977451.1 | homeobox otx5-like [Paramuricea clavata] | Q63410 Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000040837.1 | XP_046859674.1 | homeobox protein OTX1 A-like isoform X2 [Xenia sp. Carnegie-2017] | Q63410 Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 | JBrowse |
