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This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000015635.1 | CAB4027139.1 | serine arginine-rich splicing factor 2 [Paramuricea clavata] | Q14011 Cold-inducible RNA-binding protein OS=Homo sapiens OX=9606 G | JBrowse |
| Eunicella cavolini | ENSLDHP00000015641.1 | CAB4027139.1 | serine arginine-rich splicing factor 2 [Paramuricea clavata] | Q14011 Cold-inducible RNA-binding protein OS=Homo sapiens OX=9606 G | JBrowse |
| Eunicella cavolini | ENSLDHP00000017102.1 | CAB3992074.1 | glycine-rich RNA-binding 2, mitochondrial-like [Paramuricea clavata] | Q9DED4 Cold-inducible RNA-binding protein B OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000017112.1 | CAB3992074.1 | glycine-rich RNA-binding 2, mitochondrial-like [Paramuricea clavata] | Q9DED4 Cold-inducible RNA-binding protein B OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000017449.1 | CAB3992072.1 | RNA-binding [Paramuricea clavata] | O93235 Cold-inducible RNA-binding protein A OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000017458.1 | XP_028393879.1 | uncharacterized protein LOC114518142 [Dendronephthya gigantea] | O93235 Cold-inducible RNA-binding protein A OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000018272.1 | CAB3992073.1 | RNA-binding motif, X chromosome isoform X2 [Paramuricea clavata] | Q9FNR1 Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabido | JBrowse |
| Eunicella cavolini | ENSLDHP00000018386.1 | XP_046860245.1 | heterogeneous nuclear ribonucleoprotein A3 homolog 1-like [Xenia sp. Carnegie-2017] | Q9DED4 Cold-inducible RNA-binding protein B OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000020061.1 | CAB4027138.1 | cold-inducible RNA-binding B-like isoform X1 [Paramuricea clavata] | O93235 Cold-inducible RNA-binding protein A OS=Xenopus laevis OX=83 | JBrowse |
| Eunicella cavolini | ENSLDHP00000020071.1 | CAB4027138.1 | cold-inducible RNA-binding B-like isoform X1 [Paramuricea clavata] | O93235 Cold-inducible RNA-binding protein A OS=Xenopus laevis OX=83 | JBrowse |
