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This orthogroup contains 496 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 496 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 448 / 496 | 90.3% | 100.0% of 448 | ≥80% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 418 / 496 | 84.3% | 93.3% of 448 | ≥80% support |
| PANTHER | PTHR10352 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 255 / 496 | 51.4% | 57.6% of 443 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000028343.1 | CAB3978418.1 | ELAV 3 isoform X10 [Paramuricea clavata] | A0A0R4IEW8 ELAV-like protein 4 OS=Danio rerio OX=7955 GN=elavl4 PE=1 SV | JBrowse |
| Eunicella cavolini | ENSLDHP00000028348.1 | CAB3978418.1 | ELAV 3 isoform X10 [Paramuricea clavata] | P26378 ELAV-like protein 4 OS=Homo sapiens OX=9606 GN=ELAVL4 PE=1 S | JBrowse |
| Eunicella cavolini | ENSLDHP00000028358.1 | CAB3978418.1 | ELAV 3 isoform X10 [Paramuricea clavata] | P26378 ELAV-like protein 4 OS=Homo sapiens OX=9606 GN=ELAVL4 PE=1 S | JBrowse |
