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This orthogroup contains 321 genes from 129 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 321 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12247 | POLYCOMB GROUP PROTEIN | 219 / 321 | 68.2% | 97.8% of 224 | ≥50% support |
| Pfam | PF02820 | MBT | 219 / 321 | 68.2% | 98.7% of 222 | ≥50% support |
| Pfam | PF12140 | SLED | 212 / 321 | 66.0% | 95.5% of 222 | ≥50% support |
| Pfam | PF00536 | SAM_1 — SAM domain (Sterile alpha motif) | 175 / 321 | 54.5% | 78.8% of 222 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 224 / 321 | 69.8% | 100.0% of 224 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 219 / 321 | 68.2% | 97.8% of 224 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 175 / 321 | 54.5% | 78.1% of 224 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 164 / 321 | 51.1% | 73.2% of 224 | ≥50% support |
| GO | GO:0042393 Molecular Function | histone binding | 164 / 321 | 51.1% | 73.2% of 224 | ≥50% support |
| GO | GO:0045892 Biological Process | negative regulation of DNA-templated transcription | 164 / 321 | 51.1% | 73.2% of 224 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000041105.1 | CAB4032713.1 | sex comb on midleg 2 isoform X1, partial [Paramuricea clavata] | Q96GD3 Polycomb protein SCMH1 OS=Homo sapiens OX=9606 GN=SCMH1 PE=1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000041117.1 | CAB4032713.1 | sex comb on midleg 2 isoform X1, partial [Paramuricea clavata] | Q8K214 Polycomb protein SCMH1 OS=Mus musculus OX=10090 GN=Scmh1 PE= | JBrowse |
| Eunicella cavolini | ENSLDHP00000041127.1 | CAB4032713.1 | sex comb on midleg 2 isoform X1, partial [Paramuricea clavata] | Q96GD3 Polycomb protein SCMH1 OS=Homo sapiens OX=9606 GN=SCMH1 PE=1 | JBrowse |
| Eunicella cavolini | ENSLDHP00000041140.1 | CAB3996896.1 | Hypothetical predicted protein [Paramuricea clavata] | – | JBrowse |
| Eunicella cavolini | ENSLDHP00000041144.1 | XP_028409566.1 | sex comb on midleg-like protein 2 isoform X2 [Dendronephthya gigantea] | Q8K214 Polycomb protein SCMH1 OS=Mus musculus OX=10090 GN=Scmh1 PE= | JBrowse |
