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Support counts the member genes carrying the term. % of genes is that count over all 240 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10410 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 188 / 240 | 78.3% | 100.0% of 188 | ≥50% support |
| Pfam | PF01398 | JAB | 191 / 240 | 79.6% | 94.1% of 203 | ≥50% support |
| Pfam | PF18110 | BRCC36_C — BRCC36 C-terminal helical domain | 177 / 240 | 73.8% | 87.2% of 203 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 191 / 240 | 79.6% | 100.0% of 191 | ≥50% support |
| GO | GO:0008233 Molecular Function | peptidase activity | 191 / 240 | 79.6% | 100.0% of 191 | ≥50% support |
| GO | GO:0008237 Molecular Function | metallopeptidase activity | 191 / 240 | 79.6% | 100.0% of 191 | ≥50% support |
| GO | GO:0006302 Biological Process | double-strand break repair | 188 / 240 | 78.3% | 98.4% of 191 | ≥50% support |
| GO | GO:0031593 Molecular Function | polyubiquitin modification-dependent protein binding | 188 / 240 | 78.3% | 98.4% of 191 | ≥50% support |
| GO | GO:0070531 Cellular Component | BRCA1-A complex | 188 / 240 | 78.3% | 98.4% of 191 | ≥50% support |
| GO | GO:0070552 Cellular Component | BRISC complex | 188 / 240 | 78.3% | 98.4% of 191 | ≥50% support |
| GO | GO:0004843 Molecular Function | cysteine-type deubiquitinase activity | 121 / 240 | 50.4% | 63.4% of 191 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 121 / 240 | 50.4% | 63.4% of 191 | ≥50% support |
| GO | GO:0070536 Biological Process | protein K63-linked deubiquitination | 121 / 240 | 50.4% | 63.4% of 191 | ≥50% support |
| KEGG | K11864 | BRCC3, BRCC36 — DNA repair and recombination proteins | 167 / 240 | 69.6% | 99.4% of 168 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000032860.1 | CAB4004184.1 | lys-63-specific deubiquitinase BRCC36 [Paramuricea clavata] | B5X8M4 Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar OX=8030 | JBrowse |
