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This orthogroup contains 209 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 209 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12709 | DNA-DIRECTED RNA POLYMERASE II, III | 182 / 209 | 87.1% | 98.9% of 184 | ≥80% support |
| Pfam | PF08292 | RNA_pol_Rbc25 — RNA polymerase III subunit Rpc25 | 179 / 209 | 85.7% | 96.2% of 186 | ≥80% support |
| Pfam | PF03876 | SHS2_Rpb7-N — SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 | 169 / 209 | 80.9% | 90.9% of 186 | ≥80% support |
| GO | GO:0005666 Cellular Component | RNA polymerase III complex | 182 / 209 | 87.1% | 99.5% of 183 | ≥80% support |
| GO | GO:0006352 Biological Process | DNA-templated transcription initiation | 182 / 209 | 87.1% | 99.5% of 183 | ≥80% support |
| GO | GO:0006384 Biological Process | transcription initiation at RNA polymerase III promoter | 182 / 209 | 87.1% | 99.5% of 183 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 169 / 209 | 80.9% | 92.4% of 183 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 127 / 209 | 60.8% | 69.4% of 183 | ≥50% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 127 / 209 | 60.8% | 69.4% of 183 | ≥50% support |
| KEGG | K03022 | RPC8, POLR3H — Transcription machinery | 162 / 209 | 77.5% | 100.0% of 162 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000015345.1 | CAB3981232.1 | DNA-directed RNA polymerase III subunit RPC8 [Paramuricea clavata] | Q9D2C6 DNA-directed RNA polymerase III subunit RPC8 OS=Mus musculus | JBrowse |
| Eunicella cavolini | ENSLDHP00000015357.1 | CAB3981232.1 | DNA-directed RNA polymerase III subunit RPC8 [Paramuricea clavata] | Q2T9X1 DNA-directed RNA polymerase III subunit RPC8 OS=Bos taurus O | JBrowse |
