← Back to the gene family browser
This orthogroup contains 165 genes from 85 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 165 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF06701 | MIB_HERC2 | 135 / 165 | 81.8% | 88.8% of 152 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 140 / 165 | 84.9% | 100.0% of 140 | ≥80% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 140 / 165 | 84.9% | 100.0% of 140 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 138 / 165 | 83.6% | 98.6% of 140 | ≥80% support |
| PANTHER | PTHR24202 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | 121 / 165 | 73.3% | 89.0% of 136 | ≥50% support |
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 116 / 165 | 70.3% | 76.3% of 152 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 121 / 165 | 73.3% | 86.4% of 140 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Eunicella cavolini | ENSLDHP00000042891.1 | CAB3980319.1 | E3 ubiquitin- ligase HERC2 [Paramuricea clavata] | – | JBrowse |
| Eunicella cavolini | ENSLDHP00000042898.1 | CAB3980319.1 | E3 ubiquitin- ligase HERC2 [Paramuricea clavata] | Q4U2R1 E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 G | JBrowse |
