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Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Galaxea fascicularis | gfas1.m1.11375.m1 | XP_027058930.1 | homeobox protein Nkx-6.1-like [Pocillopora damicornis] | Q60554 Homeobox protein Nkx-6.1 OS=Mesocricetus auratus OX=10036 GN | JBrowse |
| Galaxea fascicularis | gfas1.m1.11508.m1 | KAJ7392404.1 | hypothetical protein OS493_012066 [Desmophyllum pertusum] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Galaxea fascicularis | gfas1.m1.13208.m1 | XP_027046345.1 | homeobox protein Hox-D4a-like [Pocillopora damicornis] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Galaxea fascicularis | gfas1.m1.13628.m1 | XP_015773675.1 | PREDICTED: homeobox protein ceh-12-like [Acropora digitifera] | P50219 Motor neuron and pancreas homeobox protein 1 OS=Homo sapiens | JBrowse |
| Galaxea fascicularis | gfas1.m1.13632.m1 | CAH3029714.1 | unnamed protein product [Porites evermanni] | O42370 Homeobox protein Hox-D3a OS=Danio rerio OX=7955 GN=hoxd3a PE | JBrowse |
| Galaxea fascicularis | gfas1.m1.13638.m1 | XP_029207020.1 | homeobox protein ceh-13-like [Acropora millepora] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Galaxea fascicularis | gfas1.m1.13639.m1 | XP_020616362.1 | homeobox protein Hox-A5-like [Orbicella faveolata] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Galaxea fascicularis | gfas1.m1.13647.m1 | CAH3029710.1 | unnamed protein product [Porites evermanni] | P17278 Homeobox protein Hox-D4 OS=Gallus gallus OX=9031 GN=HOXD4 PE | JBrowse |
| Galaxea fascicularis | gfas1.m1.13832.m1 | XP_020614362.1 | barH-like 2 homeobox protein isoform X1 [Orbicella faveolata] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Galaxea fascicularis | gfas1.m1.14093.m1 | XP_020615702.1 | homeobox protein EMX1-like [Orbicella faveolata] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Galaxea fascicularis | gfas1.m1.14376.m1 | KAJ7376026.1 | hypothetical protein OS493_037419 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Galaxea fascicularis | gfas1.m1.16372.m1 | KAJ7378104.1 | hypothetical protein OS493_024769 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Galaxea fascicularis | gfas1.m1.16373.m1 | XP_015753212.1 | PREDICTED: homeobox protein MSX-2-like [Acropora digitifera] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Galaxea fascicularis | gfas1.m1.16375.m1 | XP_020620058.1 | barH-like 1 homeobox protein [Orbicella faveolata] | Q24255 Homeobox protein B-H1 OS=Drosophila melanogaster OX=7227 GN= | JBrowse |
| Galaxea fascicularis | gfas1.m1.16379.m1 | KAJ7378110.1 | hypothetical protein OS493_024775 [Desmophyllum pertusum] | P63157 BarH-like 1 homeobox protein OS=Mus musculus OX=10090 GN=Bar | JBrowse |
| Galaxea fascicularis | gfas1.m1.16381.m1 | KAJ7378109.1 | hypothetical protein OS493_024774 [Desmophyllum pertusum] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Galaxea fascicularis | gfas1.m1.17647.m1 | XP_020632211.1 | homeobox protein Nkx-3.1-like [Orbicella faveolata] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Galaxea fascicularis | gfas1.m1.18035.m1 | XP_020619117.1 | homeobox protein Nkx-6.1-like [Orbicella faveolata] | Q06615 Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto | JBrowse |
| Galaxea fascicularis | gfas1.m1.19699.m1 | KAJ7381300.1 | hypothetical protein OS493_001421 [Desmophyllum pertusum] | O93366 T-cell leukemia homeobox protein 1 OS=Gallus gallus OX=9031 | JBrowse |
| Galaxea fascicularis | gfas1.m1.19739.m1 | XP_022791939.1 | homeobox protein EMX2-like isoform X1 [Stylophora pistillata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
