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This orthogroup contains 276 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 276 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 229 / 276 | 83.0% | 100.0% of 229 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 232 / 276 | 84.1% | 100.0% of 232 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 230 / 276 | 83.3% | 99.1% of 232 | ≥80% support |
| PANTHER | PTHR48028 | GLYCINE-RICH RNA-BINDING PROTEIN RZ1A | 148 / 276 | 53.6% | 64.9% of 228 | ≥50% support |
| KEGG | K11294 | NCL, NSR1 — Chromosome and associated proteins | 170 / 276 | 61.6% | 98.8% of 172 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Galaxea fascicularis | gfas1.m1.11118.m1 | CAH3037699.1 | unnamed protein product [Porites lobata] | P20397 Nucleolin OS=Xenopus laevis OX=8355 GN=ncl PE=2 SV=3 | JBrowse |
