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This orthogroup contains 236 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 236 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR14212 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED | 201 / 236 | 85.2% | 100.0% of 201 | ≥80% support |
| Pfam | PF08572 | PRP3 — pre-mRNA processing factor 3 domain | 197 / 236 | 83.5% | 95.2% of 207 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 201 / 236 | 85.2% | 100.0% of 201 | ≥80% support |
| GO | GO:0046540 Cellular Component | U4/U6 x U5 tri-snRNP complex | 201 / 236 | 85.2% | 100.0% of 201 | ≥80% support |
| Pfam | PF06544 | Prp3_C — Small nuclear ribonucleoprotein Prp3, C-terminal domain | 188 / 236 | 79.7% | 90.8% of 207 | ≥50% support |
| Pfam | PF01480 | PWI | 169 / 236 | 71.6% | 81.6% of 207 | ≥50% support |
| KEGG | K12843 | PRPF3, PRP3 — Spliceosome | 180 / 236 | 76.3% | 100.0% of 180 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Galaxea fascicularis | gfas1.m1.20087.m1 | CAH3046040.1 | unnamed protein product [Porites lobata] | O43395 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens O | JBrowse |
| Galaxea fascicularis | gfas1.m1.20985.m1 | XP_020622190.1 | U4/U6 small nuclear ribonucleoprotein Prp3-like isoform X1 [Orbicella faveolata] | Q5ZJ85 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus | JBrowse |
