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Support counts the member genes carrying the term. % of genes is that count over all 166 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR45751 | COPINE FAMILY PROTEIN 1 | 149 / 166 | 89.8% | 98.7% of 151 | ≥80% support |
| Pfam | PF07002 | Copine | 151 / 166 | 91.0% | 100.0% of 151 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 149 / 166 | 89.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 149 / 166 | 89.8% | 98.7% of 151 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 149 / 166 | 89.8% | 98.7% of 151 | ≥80% support |
| KEGG | K16280 | RGLG — Ubiquitin system | 136 / 166 | 81.9% | 99.3% of 137 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Chr04.877 | CAB4002345.1 | E3 ubiquitin- ligase RGLG4-like [Paramuricea clavata] | Q9SAL0 E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX | JBrowse |
| Hemicorallium imperiale | evm.model.Chr20.79 | CAB3991877.1 | E3 ubiquitin- ligase RGLG4-like, partial [Paramuricea clavata] | Q09221 Copine family protein 2 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
