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Support counts the member genes carrying the term. % of genes is that count over all 26 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10947 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 | 21 / 26 | 80.8% | 95.5% of 22 | ≥80% support |
| GO | GO:0004826 Molecular Function | phenylalanine-tRNA ligase activity | 22 / 26 | 84.6% | 91.7% of 24 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 22 / 26 | 84.6% | 91.7% of 24 | ≥80% support |
| GO | GO:0006432 Biological Process | phenylalanyl-tRNA aminoacylation | 22 / 26 | 84.6% | 91.7% of 24 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 21 / 26 | 80.8% | 87.5% of 24 | ≥80% support |
| GO | GO:0009328 Cellular Component | phenylalanine-tRNA ligase complex | 21 / 26 | 80.8% | 87.5% of 24 | ≥80% support |
| Pfam | PF03483 | B3_4 — B3/4 domain | 20 / 26 | 76.9% | 83.3% of 24 | ≥50% support |
| Pfam | PF03484 | B5 | 19 / 26 | 73.1% | 79.2% of 24 | ≥50% support |
| Pfam | PF17759 | tRNA_synthFbeta — Phenylalanyl tRNA synthetase beta chain CLM domain | 19 / 26 | 73.1% | 79.2% of 24 | ≥50% support |
| Pfam | PF01588 | tRNA_bind — Putative tRNA binding domain | 18 / 26 | 69.2% | 75.0% of 24 | ≥50% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 20 / 26 | 76.9% | 83.3% of 24 | ≥50% support |
| GO | GO:0000287 Molecular Function | magnesium ion binding | 20 / 26 | 76.9% | 83.3% of 24 | ≥50% support |
| KEGG | K01890 | FARSB, pheT — Transfer RNA biogenesis | 16 / 26 | 61.5% | 100.0% of 16 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hemicorallium imperiale | evm.model.Contig123.274 | NQZ66227.1 | phenylalanine--tRNA ligase subunit beta [Mycoplasmatales bacterium] | Q98QL4 Phenylalanine--tRNA ligase beta subunit OS=Mycoplasmopsis pu | JBrowse |
| Hemicorallium imperiale | evm.model.Contig136.69 | MBE5819395.1 | phenylalanine--tRNA ligase subunit beta [Clostridiales bacterium] | Q4L5E4 Phenylalanine--tRNA ligase beta subunit OS=Staphylococcus ha | JBrowse |
| Hemicorallium imperiale | evm.model.Contig136.70 | MBR5230700.1 | phenylalanine--tRNA ligase subunit beta [Clostridia bacterium] | Q49WQ5 Phenylalanine--tRNA ligase alpha subunit OS=Staphylococcus s | JBrowse |
