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Support counts the member genes carrying the term. % of genes is that count over all 566 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR20856 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 | 484 / 566 | 85.5% | 99.6% of 486 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 494 / 566 | 87.3% | 100.0% of 494 | ≥80% support |
| GO | GO:0003899 Molecular Function | DNA-directed 5'-3' RNA polymerase activity | 494 / 566 | 87.3% | 100.0% of 494 | ≥80% support |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 494 / 566 | 87.3% | 100.0% of 494 | ≥80% support |
| GO | GO:0032549 Molecular Function | ribonucleoside binding | 484 / 566 | 85.5% | 98.0% of 494 | ≥80% support |
| Pfam | PF00562 | RNA_pol_Rpb2_6 — RNA polymerase Rpb2, domain 6 | 411 / 566 | 72.6% | 83.2% of 494 | ≥50% support |
| Pfam | PF04563 | RNA_pol_Rpb2_1 — RNA polymerase beta subunit | 366 / 566 | 64.7% | 74.1% of 494 | ≥50% support |
| Pfam | PF04561 | RNA_pol_Rpb2_2 — RNA polymerase Rpb2, domain 2 | 362 / 566 | 64.0% | 73.3% of 494 | ≥50% support |
| Pfam | PF04560 | RNA_pol_Rpb2_7 — RNA polymerase Rpb2, domain 7 | 352 / 566 | 62.2% | 71.3% of 494 | ≥50% support |
| Pfam | PF04565 | RNA_pol_Rpb2_3 — RNA polymerase Rpb2, domain 3 | 349 / 566 | 61.7% | 70.7% of 494 | ≥50% support |
| Pfam | PF04567 | RNA_pol_Rpb2_5 — RNA polymerase Rpb2, domain 5 | 344 / 566 | 60.8% | 69.6% of 494 | ≥50% support |
| Pfam | PF04566 | RNA_pol_Rpb2_4 — RNA polymerase Rpb2, domain 4 | 339 / 566 | 59.9% | 68.6% of 494 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | BRAKERHOCP00005006436.1 | XP_047141151.1 | DNA-directed RNA polymerase III subunit RPC2 [Hydra vulgaris] | Q9NW08 DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005006437.1 | XP_047141151.1 | DNA-directed RNA polymerase III subunit RPC2 [Hydra vulgaris] | Q9NW08 DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005008682.1 | XP_047141151.1 | DNA-directed RNA polymerase III subunit RPC2 [Hydra vulgaris] | Q9NW08 DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005016454.1 | XP_002163509.3 | DNA-directed RNA polymerase II subunit RPB2 [Hydra vulgaris] | A5PJW8 DNA-directed RNA polymerase II subunit RPB2 OS=Bos taurus OX | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005017002.1 | XP_002163509.3 | DNA-directed RNA polymerase II subunit RPB2 [Hydra vulgaris] | P30876 DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens | JBrowse |
| Haliclystus octoradiatus | g165.t1.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | g166.t1.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | g2448.t1.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | g2448.t2.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | g2450.t1.1 | none | – | JBrowse |
