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Support counts the member genes carrying the term. % of genes is that count over all 440 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10378 | LIM DOMAIN-BINDING PROTEIN | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| Pfam | PF17916 | LID | 367 / 440 | 83.4% | 92.2% of 398 | ≥80% support |
| Pfam | PF01803 | LIM_bind — LIM-domain binding protein | 363 / 440 | 82.5% | 91.2% of 398 | ≥80% support |
| GO | GO:0000122 Biological Process | negative regulation of transcription by RNA polymerase II | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| GO | GO:0005667 Cellular Component | transcription regulator complex | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| GO | GO:0007399 Biological Process | nervous system development | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| GO | GO:0030274 Molecular Function | LIM domain binding | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| GO | GO:0045944 Biological Process | positive regulation of transcription by RNA polymerase II | 375 / 440 | 85.2% | 99.5% of 377 | ≥80% support |
| KEGG | K24143 | LDB2 — Domain-containing proteins not elsewhere classified | 318 / 440 | 72.3% | 99.7% of 319 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | BRAKERHOCP00005017993.1 | XP_031568829.1 | LIM domain-binding protein 2-like isoform X3 [Actinia tenebrosa] | Q1EQW7 LIM domain-binding protein 2 OS=Xenopus laevis OX=8355 GN=ld | JBrowse |
| Haliclystus octoradiatus | g1508.t1.1 | none | – | JBrowse |
