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This orthogroup contains 381 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 381 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 335 / 381 | 87.9% | 100.0% of 335 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 335 / 381 | 87.9% | 100.0% of 335 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 335 / 381 | 87.9% | 100.0% of 335 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | 11603_t.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | BRAKERHOCP00005018227.1 | XP_032829923.1 | splicing factor 3B subunit 4 [Petromyzon marinus] | Q15427 Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005020691.1 | XP_048588904.1 | RNA-binding protein 7 [Nematostella vectensis] | Q3MHY8 RNA-binding protein 7 OS=Bos taurus OX=9913 GN=RBM7 PE=2 SV= | JBrowse |
| Haliclystus octoradiatus | BRAKERHOCP00005021174.1 | XP_031559178.1 | RNA-binding protein 7-like [Actinia tenebrosa] | Q3MHY8 RNA-binding protein 7 OS=Bos taurus OX=9913 GN=RBM7 PE=2 SV= | JBrowse |
| Haliclystus octoradiatus | g7918.t1.1 | none | – | JBrowse | |
| Haliclystus octoradiatus | g9228.t1.1 | none | – | JBrowse |
