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Support counts the member genes carrying the term. % of genes is that count over all 315 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0003723 Molecular Function | RNA binding | 274 / 315 | 87.0% | 97.5% of 281 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 263 / 315 | 83.5% | 93.6% of 281 | ≥80% support |
| PANTHER | PTHR22792 | LUPUS LA PROTEIN-RELATED | 168 / 315 | 53.3% | 93.3% of 180 | ≥50% support |
| Pfam | PF08777 | RRM_3 — RNA binding motif | 238 / 315 | 75.6% | 87.2% of 273 | ≥50% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 170 / 315 | 54.0% | 62.3% of 273 | ≥50% support |
| Pfam | PF05383 | La | 162 / 315 | 51.4% | 59.3% of 273 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 191 / 315 | 60.6% | 68.0% of 281 | ≥50% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 188 / 315 | 59.7% | 66.9% of 281 | ≥50% support |
| GO | GO:0006396 Biological Process | RNA processing | 187 / 315 | 59.4% | 66.6% of 281 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 171 / 315 | 54.3% | 60.9% of 281 | ≥50% support |
| GO | GO:0008033 Biological Process | tRNA processing | 164 / 315 | 52.1% | 58.4% of 281 | ≥50% support |
| KEGG | K11090 | LA, SSB — Systemic lupus erythematosus | 174 / 315 | 55.2% | 98.9% of 176 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | BRAKERHOCP00005001880.1 | CAH3159785.1 | unnamed protein product [Porites lobata] | P10881 Lupus La protein homolog OS=Bos taurus OX=9913 GN=SSB PE=2 S | JBrowse |
| Haliclystus octoradiatus | g6731.t1.1 | none | – | JBrowse |
