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This orthogroup contains 240 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 240 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR16047 | RFWD3 PROTEIN | 209 / 240 | 87.1% | 100.0% of 209 | ≥80% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 209 / 240 | 87.1% | 99.5% of 210 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 209 / 240 | 87.1% | 99.5% of 210 | ≥80% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 209 / 240 | 87.1% | 99.5% of 210 | ≥80% support |
| GO | GO:0036297 Biological Process | interstrand cross-link repair | 209 / 240 | 87.1% | 99.5% of 210 | ≥80% support |
| Pfam | PF13639 | zf-RING_2 — Ring finger domain | 120 / 240 | 50.0% | 73.2% of 164 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 189 / 240 | 78.8% | 90.0% of 210 | ≥50% support |
| KEGG | K15691 | RFWD3 — Ubiquitin system | 148 / 240 | 61.7% | 100.0% of 148 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | BRAKERHOCP00005001828.1 | KAJ7392096.1 | RING finger and WD repeat domain-containing protein 3 [Desmophyllum pertusum] | A0A974CYQ5 E3 ubiquitin-protein ligase rfwd3.S OS=Xenopus laevis OX=835 | JBrowse |
| Haliclystus octoradiatus | g7487.t1.1 | none | – | JBrowse |
