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This orthogroup contains 232 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 232 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46232 | SMARCE1 REGULATOR OF CHROMATIN | 204 / 232 | 87.9% | 99.5% of 205 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 193 / 232 | 83.2% | 100.0% of 193 | ≥80% support |
| GO | GO:0016514 Cellular Component | SWI/SNF complex | 204 / 232 | 87.9% | 100.0% of 204 | ≥80% support |
| GO | GO:0016922 Molecular Function | nuclear receptor binding | 204 / 232 | 87.9% | 100.0% of 204 | ≥80% support |
| GO | GO:0031492 Molecular Function | nucleosomal DNA binding | 204 / 232 | 87.9% | 100.0% of 204 | ≥80% support |
| GO | GO:0045892 Biological Process | negative regulation of DNA-templated transcription | 204 / 232 | 87.9% | 100.0% of 204 | ≥80% support |
| KEGG | K11651 | SMARCE1 — Chromosome and associated proteins | 161 / 232 | 69.4% | 98.2% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Haliclystus octoradiatus | BRAKERHOCP00005011446.1 | XP_047135949.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [Hydra vulgaris] | Q56A18 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Haliclystus octoradiatus | g14231.t1.1 | none | – | JBrowse |
