← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 1,156 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30047 | HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATED | 1043 / 1,156 | 90.2% | 100.0% of 1,043 | ≥80% support |
| Pfam | PF02028 | BCCT | 1042 / 1,156 | 90.1% | 99.6% of 1,046 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0022857 Molecular Function | transmembrane transporter activity | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0071705 Biological Process | nitrogen compound transport | 1044 / 1,156 | 90.3% | 100.0% of 1,044 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
| GO | GO:0006810 Biological Process | transport | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
| GO | GO:0016021 Cellular Component | membrane | 1043 / 1,156 | 90.2% | 99.9% of 1,044 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G52534 | OLS63998.1 | High-affinity choline transport protein [Pseudomonas putida] | Q6FDF6 Osmo-independent choline transporter BetT1 OS=Acinetobacter | JBrowse |
| Hydra oligactis | HOLI00001.G53013 | WP_095159452.1 | MULTISPECIES: choline transporter BetT [Pseudomonas] | Q6FDF5 Osmo-dependent choline transporter BetT2 OS=Acinetobacter ba | JBrowse |
| Hydra oligactis | HOLI00165.G22155 | XP_012562913.1 | glycine betaine transporter 1 [Hydra vulgaris] | A0A0B5RUB0 Trimethylamine transporter OS=Myroides profundi OX=480520 GN | JBrowse |
| Hydra oligactis | HOLI00485.G29219 | XP_012556512.1 | glycine betaine transporter 1 [Hydra vulgaris] | Q87PP5 Glycine betaine/proline/choline/ectoine transporter VP1456 O | JBrowse |
| Hydra oligactis | HOLI00485.G29220 | XP_002159349.2 | probable glycine betaine transporter [Hydra vulgaris] | P45335 Uncharacterized transporter HI_1706 OS=Haemophilus influenza | JBrowse |
| Hydra oligactis | HOLI00485.G29221 | XP_002159349.2 | probable glycine betaine transporter [Hydra vulgaris] | Q87PP5 Glycine betaine/proline/choline/ectoine transporter VP1456 O | JBrowse |
| Hydra oligactis | HOLI00485.G29222 | XP_002159349.2 | probable glycine betaine transporter [Hydra vulgaris] | P9WPR6 Uncharacterized transporter MT0942 OS=Mycobacterium tubercul | JBrowse |
| Hydra oligactis | HOLI00643.G16025 | WP_094290005.1 | BCCT family transporter [Acidovorax kalamii] | Q93AK1 Ectoine/hydroxyectoine transporter OS=Virgibacillus pantothe | JBrowse |
