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Support counts the member genes carrying the term. % of genes is that count over all 211 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR32071 | TRANSCRIPTIONAL REGULATORY PROTEIN | 199 / 211 | 94.3% | 96.6% of 206 | ≥80% support |
| Pfam | PF00158 | Sigma54_activat — Sigma-54 interaction domain | 197 / 211 | 93.4% | 94.7% of 208 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0008134 Molecular Function | transcription factor binding | 200 / 211 | 94.8% | 97.1% of 206 | ≥80% support |
| GO | GO:0016887 Molecular Function | ATP hydrolysis activity | 183 / 211 | 86.7% | 88.8% of 206 | ≥80% support |
| Pfam | PF02954 | HTH_8 — Bacterial regulatory protein, Fis family | 154 / 211 | 73.0% | 74.0% of 208 | ≥50% support |
| Pfam | PF00072 | Response_reg — Response regulator receiver domain | 119 / 211 | 56.4% | 57.2% of 208 | ≥50% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 154 / 211 | 73.0% | 74.8% of 206 | ≥50% support |
| GO | GO:0000160 Biological Process | phosphorelay signal transduction system | 127 / 211 | 60.2% | 61.7% of 206 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G49686 | WP_177454432.1 | sigma-54 dependent transcriptional regulator [Pseudomonas sp. Irchel 3E13] | P29267 Hydrogenase transcriptional regulatory protein HoxA OS=Cupri | JBrowse |
| Hydra oligactis | HOLI00001.G50063 | WP_262127337.1 | sigma 54-interacting transcriptional regulator [Pseudomonas sp. 5P_5.1_Bac1] | P0AFU4 Transcriptional regulatory protein GlrR OS=Escherichia coli | JBrowse |
| Hydra oligactis | HOLI00001.G50335 | WP_262127375.1 | MULTISPECIES: sigma-54 dependent transcriptional regulator [unclassified Pseudomonas] | Q00934 Response regulator protein PilR OS=Pseudomonas aeruginosa (s | JBrowse |
| Hydra oligactis | HOLI00001.G50505 | WP_262156151.1 | MULTISPECIES: sigma-54 dependent transcriptional regulator [unclassified Pseudomonas] | Q9APD9 Transcriptional regulatory protein ZraR OS=Klebsiella oxytoc | JBrowse |
| Hydra oligactis | HOLI00001.G50507 | WP_110972947.1 | ATP-binding protein [Pseudomonas huaxiensis] | Q9APE0 Sensor histidine kinase ZraS OS=Klebsiella oxytoca OX=571 GN | JBrowse |
| Hydra oligactis | HOLI00001.G50594 | WP_110971102.1 | sigma-54 dependent transcriptional regulator [Pseudomonas huaxiensis] | P25852 Transcriptional regulatory protein ZraR OS=Salmonella typhim | JBrowse |
| Hydra oligactis | HOLI00001.G50695 | WP_262131098.1 | sigma-54 dependent transcriptional regulator [Pseudomonas sp. 5P_5.1_Bac1] | Q845S7 Sigma54-dependent transcriptional activator SfnR OS=Pseudomo | JBrowse |
| Hydra oligactis | HOLI00001.G51095 | WP_175651884.1 | sigma-54-dependent Fis family transcriptional regulator [Pseudomonas sp. Marseille-P9899] | P28614 Acetoin catabolism regulatory protein OS=Cupriavidus necator | JBrowse |
| Hydra oligactis | HOLI00001.G51365 | WP_262130136.1 | sigma-54 dependent transcriptional regulator [Pseudomonas sp. 5P_5.1_Bac1] | Q9I4N3 Response regulator protein FleR OS=Pseudomonas aeruginosa (s | JBrowse |
| Hydra oligactis | HOLI00001.G51367 | WP_075802652.1 | sigma-54 dependent transcriptional regulator [Pseudomonas putida] | G3XCV0 Transcriptional regulator FleQ OS=Pseudomonas aeruginosa (st | JBrowse |
| Hydra oligactis | HOLI00001.G51658 | RWW90924.1 | hypothetical protein BHE74_00001319 [Ensete ventricosum] | Q9HU19 C4-dicarboxylate transport transcriptional regulatory protei | JBrowse |
| Hydra oligactis | HOLI00001.G51737 | WP_175652225.1 | sigma-54 dependent transcriptional regulator [Pseudomonas sp. Marseille-P9899] | Q9HU19 C4-dicarboxylate transport transcriptional regulatory protei | JBrowse |
| Hydra oligactis | HOLI00001.G52104 | WP_110968902.1 | sigma-54 dependent transcriptional regulator [Pseudomonas huaxiensis] | P25852 Transcriptional regulatory protein ZraR OS=Salmonella typhim | JBrowse |
| Hydra oligactis | HOLI00001.G52768 | WP_075801986.1 | sigma-54-dependent response regulator transcription factor AlgB [Pseudomonas putida] | Q88RJ6 Alginate biosynthesis transcriptional regulatory protein Alg | JBrowse |
| Hydra oligactis | HOLI00001.G53095 | WP_095159421.1 | MULTISPECIES: sigma 54-interacting transcriptional regulator [unclassified Pseudomonas] | Q845S7 Sigma54-dependent transcriptional activator SfnR OS=Pseudomo | JBrowse |
| Hydra oligactis | HOLI00001.G53136 | WP_262129770.1 | MULTISPECIES: ATP-binding protein [unclassified Pseudomonas] | Q9HU20 C4-dicarboxylate transport sensor protein DctB OS=Pseudomona | JBrowse |
| Hydra oligactis | HOLI00001.G53626 | WP_175653192.1 | sigma-54-dependent Fis family transcriptional regulator [Pseudomonas sp. Marseille-P9899] | P26047 Signal-transduction and transcriptional-control protein OS=C | JBrowse |
| Hydra oligactis | HOLI00001.G53710 | WP_175653133.1 | nitric oxide reductase transcriptional regulator NorR [Pseudomonas sp. Marseille-P9899] | Q9K4V0 Nitric oxide reductase transcription regulator NorR1 OS=Cupr | JBrowse |
| Hydra oligactis | HOLI00001.G53840 | WP_110968123.1 | sigma-54-dependent transcriptional regulator [Pseudomonas huaxiensis] | P07604 HTH-type transcriptional regulatory protein TyrR OS=Escheric | JBrowse |
| Hydra oligactis | HOLI00002.G17832 | MBX3165308.1 | sigma-54-dependent Fis family transcriptional regulator [Bacteroidota bacterium] | P14375 Transcriptional regulatory protein ZraR OS=Escherichia coli | JBrowse |
