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Support counts the member genes carrying the term. % of genes is that count over all 114 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00563 | EAL | 98 / 114 | 86.0% | 92.5% of 106 | ≥80% support |
| Pfam | PF00990 | GGDEF | 67 / 114 | 58.8% | 63.2% of 106 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G49292 | WP_175651660.1 | GGDEF domain-containing phosphodiesterase [Pseudomonas sp. Marseille-P9899] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G49969 | WP_110971177.1 | EAL domain-containing protein [Pseudomonas huaxiensis] | P75995 Probable cyclic di-GMP phosphodiesterase PdeG OS=Escherichia | JBrowse |
| Hydra oligactis | HOLI00001.G50216 | WP_095153519.1 | EAL domain-containing protein [Pseudomonas sp. Irchel 3E13] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G50328 | WP_042129822.1 | EAL domain-containing protein [Pseudomonas japonica] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G51050 | WP_095156787.1 | EAL domain-containing protein [Pseudomonas sp. Irchel 3E13] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G51152 | WP_095157872.1 | EAL domain-containing protein [Pseudomonas sp. Irchel 3E13] | P76129 Oxygen sensor protein DosP OS=Escherichia coli (strain K12) | JBrowse |
| Hydra oligactis | HOLI00001.G51498 | WP_262129012.1 | EAL domain-containing protein [Pseudomonas sp. 5P_5.1_Bac1] | Q8EJM6 Cyclic di-GMP phosphodiesterase PdeB OS=Shewanella oneidensi | JBrowse |
| Hydra oligactis | HOLI00001.G51807 | OLS59399.1 | Phytochrome-like protein cph2 [Pseudomonas putida] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G52404 | WP_262153390.1 | MULTISPECIES: bifunctional diguanylate cyclase/phosphodiesterase [unclassified Pseudomonas] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G52466 | WP_095156215.1 | MULTISPECIES: GGDEF and EAL domain-containing protein [unclassified Pseudomonas] | Q9HYT3 Cyclic di-GMP phosphodiesterase NbdA OS=Pseudomonas aerugino | JBrowse |
| Hydra oligactis | HOLI00001.G52730 | WP_262130973.1 | MULTISPECIES: bifunctional diguanylate cyclase/phosphodiesterase [unclassified Pseudomonas] | Q9HYT3 Cyclic di-GMP phosphodiesterase NbdA OS=Pseudomonas aerugino | JBrowse |
| Hydra oligactis | HOLI00001.G52900 | WP_175653091.1 | DUF3617 domain-containing protein [Pseudomonas sp. Marseille-P9899] | P31047 Uncharacterized protein in lpd-3 5'region (Fragment) OS=Pseu | JBrowse |
| Hydra oligactis | HOLI00001.G52907 | WP_175653082.1 | EAL domain-containing protein [Pseudomonas sp. Marseille-P9899] | Q9HYT3 Cyclic di-GMP phosphodiesterase NbdA OS=Pseudomonas aerugino | JBrowse |
| Hydra oligactis | HOLI00001.G53077 | WP_095159441.1 | MULTISPECIES: GGDEF and EAL domain-containing protein [unclassified Pseudomonas] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00001.G53276 | WP_110973374.1 | EAL domain-containing protein [Pseudomonas huaxiensis] | Q9ABX9 Uncharacterized signaling protein CC_0091 OS=Caulobacter vib | JBrowse |
| Hydra oligactis | HOLI00001.G53507 | WP_095159897.1 | EAL domain-containing protein [Pseudomonas sp. Irchel 3E13] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
| Hydra oligactis | HOLI00014.G10236 | WP_105259310.1 | EAL domain-containing protein [Rhodoferax sp. TS-BS-61-7] | – | JBrowse |
| Hydra oligactis | HOLI00014.G10237 | WP_105259310.1 | EAL domain-containing protein [Rhodoferax sp. TS-BS-61-7] | Q9ABX9 Uncharacterized signaling protein CC_0091 OS=Caulobacter vib | JBrowse |
| Hydra oligactis | HOLI00014.G9385 | WP_105261547.1 | EAL domain-containing protein [Rhodoferax sp. TS-BS-61-7] | P55552 Uncharacterized protein y4lL OS=Sinorhizobium fredii (strain | JBrowse |
| Hydra oligactis | HOLI00014.G9426 | WP_105261589.1 | EAL domain-containing protein [Rhodoferax sp. TS-BS-61-7] | Q9I310 Bifunctional diguanylate cyclase/cyclic di-GMP phosphodieste | JBrowse |
