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Support counts the member genes carrying the term. % of genes is that count over all 19 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30118 | HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED | 16 / 19 | 84.2% | 100.0% of 16 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 17 / 19 | 89.5% | 100.0% of 17 | ≥80% support |
| Pfam | PF03466 | LysR_substrate — LysR substrate binding domain | 15 / 19 | 79.0% | 93.8% of 16 | ≥50% support |
| Pfam | PF00126 | HTH_1 — Bacterial regulatory helix-turn-helix protein, lysR family | 12 / 19 | 63.2% | 75.0% of 16 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 15 / 19 | 79.0% | 88.2% of 17 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G49809 | WP_110972404.1 | LysR family transcriptional regulator [Pseudomonas huaxiensis] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50362 | WP_110968660.1 | LysR family transcriptional regulator [Pseudomonas huaxiensis] | Q9EXL7 HTH-type transcriptional activator NagR OS=Ralstonia sp. OX= | JBrowse |
| Hydra oligactis | HOLI00001.G50787 | ABX21780.1 | hypothetical protein SARI_01897 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-] | – | JBrowse |
| Hydra oligactis | HOLI00001.G50886 | WP_095157228.1 | MULTISPECIES: LysR family transcriptional regulator [unclassified Pseudomonas] | Q9EXL7 HTH-type transcriptional activator NagR OS=Ralstonia sp. OX= | JBrowse |
| Hydra oligactis | HOLI00001.G51088 | WP_009615913.1 | MULTISPECIES: LysR family transcriptional regulator [Pseudomonas] | Q52838 Nodulation protein D 1 OS=Mesorhizobium japonicum (strain LM | JBrowse |
| Hydra oligactis | HOLI00001.G51925 | WP_110969690.1 | MULTISPECIES: LysR family transcriptional regulator [Pseudomonas] | – | JBrowse |
| Hydra oligactis | HOLI00001.G53570 | WP_175653239.1 | LysR family transcriptional regulator [Pseudomonas sp. Marseille-P9899] | P55619 HTH-type transcriptional regulator SyrM 1 OS=Sinorhizobium f | JBrowse |
| Hydra oligactis | HOLI00001.G53725 | WP_110973280.1 | LysR family transcriptional regulator [Pseudomonas huaxiensis] | P52679 PCP degradation transcriptional activation protein OS=Sphing | JBrowse |
| Hydra oligactis | HOLI00014.G9806 | WP_105260217.1 | LysR family transcriptional regulator [Rhodoferax sp. TS-BS-61-7] | – | JBrowse |
| Hydra oligactis | HOLI00353.G43101 | MBU2181158.1 | LysR family transcriptional regulator [Gammaproteobacteria bacterium] | P10183 HTH-type transcriptional activator NahR OS=Pseudomonas putid | JBrowse |
| Hydra oligactis | HOLI01031.G12797 | WP_105262642.1 | LysR family transcriptional regulator [Rhodoferax sp. TS-BS-61-7] | Q9EXL7 HTH-type transcriptional activator NagR OS=Ralstonia sp. OX= | JBrowse |
| Hydra oligactis | HOLI01051.G37029 | RLJ37564.1 | DNA-binding transcriptional LysR family regulator [Acidovorax sp. 106] | Q45264 Nodulation protein D 1 OS=Bradyrhizobium diazoefficiens (str | JBrowse |
| Hydra oligactis | HOLI02969.G47586 | WP_146191356.1 | LysR family transcriptional regulator, partial [Acidovorax sp. HMWF018] | P10183 HTH-type transcriptional activator NahR OS=Pseudomonas putid | JBrowse |
| Hydra oligactis | HOLI02969.G47587 | EER59604.1 | transcriptional regulator, LysR family [Acidovorax delafieldii 2AN] | – | JBrowse |
| Hydra oligactis | HOLI03105.G4909 | WP_171012397.1 | LysR family transcriptional regulator [Acidovorax sp. NB1] | – | JBrowse |
| Hydra oligactis | HOLI03250.G1060 | WP_130362219.1 | LysR family transcriptional regulator [Pigmentiphaga kullae] | – | JBrowse |
