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Support counts the member genes carrying the term. % of genes is that count over all 9 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30579 | TRANSCRIPTIONAL REGULATOR | 7 / 9 | 77.8% | 87.5% of 8 | ≥50% support |
| Pfam | PF00126 | HTH_1 — Bacterial regulatory helix-turn-helix protein, lysR family | 7 / 9 | 77.8% | 87.5% of 8 | ≥50% support |
| Pfam | PF03466 | LysR_substrate — LysR substrate binding domain | 5 / 9 | 55.6% | 62.5% of 8 | ≥50% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 7 / 9 | 77.8% | 87.5% of 8 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 7 / 9 | 77.8% | 87.5% of 8 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G51804 | WP_042123010.1 | LysR family transcriptional regulator ArgP [Pseudomonas japonica] | Q3K7N4 HTH-type transcriptional regulator ArgP OS=Pseudomonas fluor | JBrowse |
| Hydra oligactis | HOLI00014.G9653 | WP_105261950.1 | LysR family transcriptional regulator ArgP [Rhodoferax sp. TS-BS-61-7] | Q02H78 HTH-type transcriptional regulator ArgP OS=Pseudomonas aerug | JBrowse |
| Hydra oligactis | HOLI00150.G2093 | WP_105260476.1 | LysR family transcriptional regulator ArgP [Rhodoferax sp. TS-BS-61-7] | Q02H78 HTH-type transcriptional regulator ArgP OS=Pseudomonas aerug | JBrowse |
| Hydra oligactis | HOLI00299.G46826 | WP_031569898.1 | LysR family transcriptional regulator ArgP [Pararheinheimera texasensis] | – | JBrowse |
| Hydra oligactis | HOLI00299.G46827 | WP_031569898.1 | LysR family transcriptional regulator ArgP [Pararheinheimera texasensis] | Q3K7N4 HTH-type transcriptional regulator ArgP OS=Pseudomonas fluor | JBrowse |
| Hydra oligactis | HOLI00643.G16067 | WP_108616285.1 | LysR family transcriptional regulator ArgP [Acidovorax sp. HMWF029] | Q02H78 HTH-type transcriptional regulator ArgP OS=Pseudomonas aerug | JBrowse |
