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Support counts the member genes carrying the term. % of genes is that count over all 8 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF02482 | Ribosomal_S30AE — Sigma 54 modulation protein / S30EA ribosomal protein | 7 / 8 | 87.5% | 100.0% of 7 | ≥80% support |
| GO | GO:0044238 Biological Process | primary metabolic process | 7 / 8 | 87.5% | 100.0% of 7 | ≥80% support |
| PANTHER | PTHR33231 | 30S RIBOSOMAL PROTEIN | 6 / 8 | 75.0% | 85.7% of 7 | ≥50% support |
| GO | GO:0022627 Cellular Component | cytosolic small ribosomal subunit | 6 / 8 | 75.0% | 85.7% of 7 | ≥50% support |
| GO | GO:0043024 Molecular Function | ribosomal small subunit binding | 6 / 8 | 75.0% | 85.7% of 7 | ≥50% support |
| GO | GO:0045900 Biological Process | negative regulation of translational elongation | 6 / 8 | 75.0% | 85.7% of 7 | ≥50% support |
| KEGG | K05808 | hpf — Ribosome biogenesis | 6 / 8 | 75.0% | 100.0% of 6 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G53812 | WP_273909110.1 | MULTISPECIES: ribosome-associated translation inhibitor RaiA [unclassified Pseudomonas] | P0A147 Ribosome hibernation promoting factor OS=Pseudomonas putida | JBrowse |
| Hydra oligactis | HOLI00014.G10105 | WP_105260336.1 | ribosome-associated translation inhibitor RaiA [Rhodoferax sp. TS-BS-61-7] | P28613 Ribosome hibernation promoting factor OS=Cupriavidus necator | JBrowse |
| Hydra oligactis | HOLI00299.G46670 | OSM89338.1 | RNA polymerase factor sigma-54 [Escherichia coli SHECO002] | Q9S0L2 RNA polymerase sigma-54 factor OS=Shewanella violacea (strai | JBrowse |
