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Support counts the member genes carrying the term. % of genes is that count over all 4 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30146 | LACI-RELATED TRANSCRIPTIONAL REPRESSOR | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| Pfam | PF00356 | LacI | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| GO | GO:0000976 Molecular Function | transcription cis-regulatory region binding | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| GO | GO:0003677 Molecular Function | DNA binding | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| KEGG | K06145 | gntR — Transcription factors | 4 / 4 | 100.0% | 100.0% of 4 | 100% consensus |
| Pfam | PF13377 | Peripla_BP_3 — Periplasmic binding protein-like domain | 3 / 4 | 75.0% | 75.0% of 4 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydra oligactis | HOLI00001.G50021 | WP_095155046.1 | MULTISPECIES: LacI family DNA-binding transcriptional regulator [unclassified Pseudomonas] | Q9I1F6 HTH-type transcriptional regulator GntR OS=Pseudomonas aerug | JBrowse |
| Hydra oligactis | HOLI00150.G1866 | WP_105262422.1 | LacI family DNA-binding transcriptional regulator [Rhodoferax sp. TS-BS-61-7] | Q9I1F6 HTH-type transcriptional regulator GntR OS=Pseudomonas aerug | JBrowse |
| Hydra oligactis | HOLI02137.G15345 | MBT9514231.1 | LacI family DNA-binding transcriptional regulator [Acidovorax sp.] | Q9I1F6 HTH-type transcriptional regulator GntR OS=Pseudomonas aerug | JBrowse |
