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Support counts the member genes carrying the term. % of genes is that count over all 2 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | 2 / 2 | 100.0% | 100.0% of 2 | 100% consensus |
| Pfam | PF03466 | LysR_substrate — LysR substrate binding domain | 2 / 2 | 100.0% | 100.0% of 2 | 100% consensus |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2 / 2 | 100.0% | 100.0% of 2 | 100% consensus |
| GO | GO:0006351 Biological Process | DNA-templated transcription | 2 / 2 | 100.0% | 100.0% of 2 | 100% consensus |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 2 / 2 | 100.0% | 100.0% of 2 | 100% consensus |
| Pfam | PF00126 | HTH_1 — Bacterial regulatory helix-turn-helix protein, lysR family | 1 / 2 | 50.0% | 50.0% of 2 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1 / 2 | 50.0% | 50.0% of 2 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Genome browser |
|---|---|---|---|---|
| Hydra oligactis | HOLI00014.G9688 | WP_105261847.1 | LysR family transcriptional regulator [Rhodoferax sp. TS-BS-61-7] | JBrowse |
