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1 sequences in this family share a gene identifier with another member, so the 2,804 sequences above are 2,803 distinct genes — none is counted twice.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydractinia symbiolongicarpus | HSymV2.0_g06.09974_t1 | CAH3171486.1 | unnamed protein product [Porites lobata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g06.10618_t1 | XP_012554875.2 | fat-like cadherin-related tumor suppressor homolog [Hydra vulgaris] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g06.11343_t1 | XP_012554875.2 | fat-like cadherin-related tumor suppressor homolog [Hydra vulgaris] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g08.12887_t1 | AFI99113.1 | dachsous protocadherin [Clytia hemisphaerica] | Q24292 Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g08.12899_t1 | XP_012558268.2 | protocadherin Fat 1 [Hydra vulgaris] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g08.13173_t1 | XP_035681475.1 | LOW QUALITY PROTEIN: protocadherin Fat 4-like [Branchiostoma floridae] | P33450 Cadherin-related tumor suppressor OS=Drosophila melanogaster | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g10.17897_t1 | XP_047134181.1 | uncharacterized protein LOC100202892 isoform X1 [Hydra vulgaris] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g10.18326_t1 | XP_048580320.1 | uncharacterized protein LOC116612238 isoform X1 [Nematostella vectensis] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g10.18513_t1 | XP_048580320.1 | uncharacterized protein LOC116612238 isoform X1 [Nematostella vectensis] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g14.24053_t1 | CAH3046991.1 | unnamed protein product [Porites lobata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g14.24261_t1 | XP_047123570.1 | protocadherin Fat 4 isoform X2 [Hydra vulgaris] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g14.24318_t1 | XP_048580320.1 | uncharacterized protein LOC116612238 isoform X1 [Nematostella vectensis] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g15.25174_t1 | XP_020616832.1 | protocadherin Fat 4-like [Orbicella faveolata] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g15.25190_t1 | XP_047124116.1 | cadherin EGF LAG seven-pass G-type receptor 2 isoform X1 [Hydra vulgaris] | Q14517 Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV= | JBrowse |
