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Support counts the member genes carrying the term. % of genes is that count over all 1,759 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 1462 / 1,759 | 83.1% | 99.9% of 1,464 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1493 / 1,759 | 84.9% | 99.9% of 1,494 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 1476 / 1,759 | 83.9% | 98.8% of 1,494 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00040_t1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | O94432 Uncharacterized RNA-binding protein C660.15 OS=Schizosacchar | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00041_t1 | XP_012555247.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | Q96DH6 RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=960 | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00044_t1 | XP_012555247.1 | RNA-binding protein Musashi homolog 2 isoform X2 [Hydra vulgaris] | O43347 RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=960 | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00219_t1 | XP_012555244.1 | RNA-binding protein Musashi homolog 2 isoform X3 [Hydra vulgaris] | Q9VVE5 RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melan | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g03.05943_t1 | XP_012559382.1 | heterogeneous nuclear ribonucleoprotein A0 [Hydra vulgaris] | P51991 Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens O | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g05.09236_t1 | XP_002155150.3 | uncharacterized RNA-binding protein C660.15 [Hydra vulgaris] | Q9TTV2 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Saguinus o | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g06.10624_t1 | XP_047144972.1 | heterogeneous nuclear ribonucleoprotein A/B-like [Hydra vulgaris] | Q99020 Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g06.11341_t1 | XP_047144972.1 | heterogeneous nuclear ribonucleoprotein A/B-like [Hydra vulgaris] | Q99020 Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g10.19028_t1 | XP_047134629.1 | heterogeneous nuclear ribonucleoprotein A3 isoform X2 [Hydra vulgaris] | Q13151 Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens O | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g12.21301_t1 | XP_002154409.1 | nuclear polyadenylated RNA-binding protein 4 [Hydra vulgaris] | P51991 Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens O | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g13.23317_t1 | XP_047142542.1 | RNA-binding protein Musashi homolog 2 isoform X1 [Hydra vulgaris] | Q920Q6 RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=100 | JBrowse |
