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Support counts the member genes carrying the term. % of genes is that count over all 448 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 364 / 448 | 81.3% | 98.9% of 368 | ≥80% support |
| PANTHER | PTHR15710 | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 353 / 448 | 78.8% | 97.5% of 362 | ≥50% support |
| Pfam | PF13639 | zf-RING_2 — Ring finger domain | 358 / 448 | 79.9% | 95.0% of 377 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 345 / 448 | 77.0% | 93.8% of 368 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 345 / 448 | 77.0% | 93.8% of 368 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00360_t1 | XP_012555640.1 | E3 ubiquitin-protein ligase RNF126-B [Hydra vulgaris] | Q9Y4L5 E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 G | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g01.00524_t1 | XP_012555640.1 | E3 ubiquitin-protein ligase RNF126-B [Hydra vulgaris] | Q9Y4L5 E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 G | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g09.17321_t1 | XP_047133102.1 | E3 ubiquitin-protein ligase SIRP1 isoform X1 [Hydra vulgaris] | Q9VHI7 E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g09.17322_t1 | XP_047133102.1 | E3 ubiquitin-protein ligase SIRP1 isoform X1 [Hydra vulgaris] | Q9VHI7 E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g12.22013_t1 | XP_002154423.1 | E3 ubiquitin-protein ligase RNF181 [Hydra vulgaris] | Q5M974 E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis OX= | JBrowse |
